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Academic title: RNDr.
Phone: +420 585632184
Groups: IMTM, LEM, STAFF

About me

EDUCATION

2002 – 2009     Title PhD, 1st. Faculty of Medicine, Charles University in Prague

2009                 Title RNDr., Faculty of Science, Charles University in Prague

1997 – 2002     Title MSc., Faculty of Natural Sciences, Comenius University in Bratislava

Area of interest, the basic used technologies and special knowledge

- The effect of the precursors of nucleic acids on their metabolism and cellular metabolism, the development of the new methods for the detection of proliferation activity of mammalian cells and systems for the fast detection of proteins based on the magnetic separations, organisation of chromatin, DNA replication and repair, the development of the new methods for measurement of enzyme activity, study of base excision repair and its use in cancer treatment.

- Immunocytochemical detections, confocal and light microscopy, molecular biology methods, cell cultivation, electron microscopy including electron tomography, high pressure freezing and freeze substitution.

- Other knowledge: work with Microsoft Office, Adobe Photoshop, Corel Draw, ImageJ, Cell Profiler, ilastik, Graphad Prism, 3D model programs: Amira.

PUBLICATIONS

  1. Ligasová A., et al. (2023) Sc. Rep. 13: 20530
  2. Ligasová A., et al. (2023) Int J Mol Sci 24(4): 3674
  3. Hodoň J., et al. (2022) Eur J Med Chem 243: 114777
  4. Ligasová A., et al. (2021) Open Biol 11(10): 210136
  5. Ligasová A., Koberna K. (2021) Int J Mol Sci 22(19): 10759
  6. Ligasová A., Koberna K. (2021) Molecules 26(18): 5515
  7. Ligasová A., Koberna K. (2021) Int J Mol Sci 22(13): 7098
  8. Ligasová A., Koberna K. (2021) Chapter 17, pp 111-120, In Laboratory Techniques in Cellular and Molecular Medicine, Agrawal, K., Bouchal, J., Das, V., Drábek, J., Džubák, P., Hajdúch, M., Koberna, K., Ligasová, A., Mistrík, M., de Sanctis, J.B., et al., Eds. Palacký University Olomouc: Olomouc.
  9. Ligasová A., Koberna K. (2021) Chapter 18, pp 121-132, In Laboratory Techniques in Cellular and Molecular Medicine, Agrawal, K., Bouchal, J., Das, V., Drábek, J., Džubák, P., Hajdúch, M., Koberna, K., Ligasová, A., Mistrík, M., de Sanctis, J.B., et al., Eds. Palacký University Olomouc: Olomouc.
  10. Ligasová A., et al. (2019) Cells, 8(12): E1510
  11. Ligasová A., Koberna K. (2019) Sci. Rep., 9(1): 8701
  12. Ligasová A., Koberna K. (2018) Molecules, 23(11): 3007
  13. Ligasová, A., et al. (2017) PLoS One 12(4): e0175880
  14. Ligasová, A., et al. (2017) PLoS One 12(3): e0174893
  15. Ligasová, A., et al. (2016) Open Biol, 6:150172
  16. Ligasová, A., Koberna, K. (2015) Methods Mol. Biol., 1351:81-92, M. McKenzie ed.
  17. Ligasová, A., et al. (2015) PLoS One 10(7): e0132393
  18. Ligasová, A., et al. (2015) PLoS One, 10(2): e0117459
  19. Cmarko, D., et al. (2014) Methods Mol. Biol., 1117:343-66, John Kuo ed.
  20. Ligasová, A., et al. (2013) PLoS One, 8(6):e66864
  21. Ligasová, A., et al. (2012) PLoS One, 7(12):e52584
  22. Liboska, R., et al. (2012) PLoS One, 7(12):e51679
  23. Ligasová, A., et al. (2011) Parasit. Vectors, 4:162
  24. Ligasová, A., Koberna, K. (2011) DNA replication-Current Advances, Intech, H. Seligmann ed.
  25. Ligasová, A., Koberna K. (2010) Nucleic Acids Res., 38(16):e167
  26. Ligasová, A., et al. (2009) J. Struct. Biol., 165(3):204-213
  27. Cvačková, Z., et al. (2008) Chromosoma, 117(5):487-497
  28. Kalmárová, M., et al. (2007) J. Struct. Biol., 160(1):49-56
  29. Koberna, K., et al. (2005) J. Cell Biochem., 94(1):126-138

PATENTS

  • Czech: 302613; 303230; 303251; 303252; 306187; 307016; 307807; 307304; 307454; 307415; 308519; 308385; 308387, 309218
  • European: 3186387, 3395956, 3558526

UTILITY MODELS

  • Czech: 28964; 34386; 34442

INDUSTRIAL DESIGN

  • Czech: 3668

Journals

Quantification of fixed adherent cells using a strong enhancer of the fluorescence of DNA dyes. Scientific Reports. 2019, 9(1), 8701, ISSN: 2045-2322, PMID: 31213648,
DNA Replication: From Radioisotopes to Click Chemistry. Molecules. 2018, 23(11), pii: E3007, ISSN: 1420-3049, PMID: 30453631,  PDF.
Cell cycle profiling by image and flow cytometry: The optimised protocol for the detection of replicational activity using 5-Bromo-2'-deoxyuridine, low concentration of hydrochloric acid and exonuclease III. PLOS One. 2017, 12(4), e0175880, ISSN: 1932-6203, PMID: 28426799,  PDF.

Intellectual property

METHOD FOR DETERMINING THE ACTIVITY OF AN ENZYME CAUSING DNA DEGRADATION (Koberna)

1. Patent: CZ 308387; Granted: 4.6.2020; Ownership: Palacky University, Olomouc; Inventors: Koberna Karel, Ligasová Anna

Status: Terminated

DEVICE FOR MAGNETIC SEPARATION OF FERROMAGNETIC PARTICLES, KIT FOR MAGNETIC SEPARATION OF THE PARTICLES, METHOD OF SEPARATION OF MAGNETIC PARTICLES FROM A SOLUTION AND USE THEREOF "Magnetic Unitrap" (Koberna)
  1. Patent: CZ 306187, Granted: 3.8.2016, Ownership: Palacky University Olomouc, Inventors:  Koberna Karel, Ligasová Anna
  2. Published Application PCT/CZ2016/050006 under WO 2016/134683 (publ. 1.9.2016)
  3. Published Application EP 16713727.2 under EP 3261772 (publ. 3.1.2018) - refused

Status: Terminated

METHOD OF DETERMINING THE ACTIVITY OF ENZYMES CONVERTING CYTOSINE DERIVATIVES TO URACIL DERIVATIVES IN CELLS, TISSUES AND ORGANISMS "Deaminázy-CLICK" (Koberna)
  1. Patent: CZ 309218; Granted: 22.4.2022; Ownership: Palacký University Olomouc, Institute of Organic Chemistry and Biochemistry CAS; Inventors: Koberna Karel, Ligasová Anna
  2. Published Application PCT/CZ2015/000097 under WO 2016/029889 (3.3.2016)
  3. Patent: EP 3186387; Granted: 17.10.2018; Ownership: Palacký University Olomouc, Institute of Organic Chemistry and Biochemistry CAS, Institute of Applied Biotechnologies a.s.; Inventors: Koberna Karel, Ligasová Anna, Rosenberg Ivan, Liboska Radek, Páv Ondřej, Kvapil Petr, Fišer Petr

Status: Terminated